Water

The collaborative design which joins wildlife biologists and hydrologists enables ARMI to ask the kinds of questions it does about the environmental variables that affect amphibians in a truly integrated manner. Understanding how water quality, quantity, or timing affects amphibians is a critical component of ARMI research.

A hydrologist is associated with each ARMI region and works with the ARMI PI to develop and implement research and monitoring projects. These collaborations enable ARMI to ask questions about how water quality (e.g., nutrients, agro-chemicals, acidification), water budgets (e.g., ground and surface water models), storm surge impacts, or other hydrologic conditions can affect amphibian life cycles, disease transport, or habitat quality.

Resources

Hydrologic Investigations
USGS Toxics Substances Hydrology program

Pesticide lab.
K. Jones (USGS) extracting a water sample for pesticide analysis at Pesticide Fate Research Laboratory. Photo by: R. Todd.

Water - ARMI Papers & Reports

Papers & Reports Native amphibian toxin reduces invasive crayfish feeding with potential benefits to stream biodiversity
Authors: Gary Bucciarelli; Sierra J. Smith; Justin J. Choe; Phoebe D. Shin; Robert N Fisher; Lee B Kats
Date: 2023-09-13 | Outlet: BMC Ecology and Evolution 23, 51
Biodiversity is generally reduced when non-native species invade an ecosystem. Invasive crayfish, Procambarus clarkii, populate California freshwater streams, and in the Santa Monica Mountains (Los Angeles, USA), their introduction has led to trophic cascades due to omnivorous feeding behavior and a rapid rate of population growth. The native California newt, Taricha torosa, possesses a neurotoxin, tetrodotoxin (TTX), that affects freshwater animal behavior. Given P. clarkii has a limited evolutionary history with TTX, we hypothesized that TTX may affect crayfish feeding behaviors. To determine if TTX affects P. clarkii behavior, we measured cumulative movement and various feeding behaviors of P. clarkii exposed to (i) waterborne, ecologically realistic concentrations of TTX (~?3.0?×?10??8 moles/L), (ii) an anuran chemical cue to account for intraguild cues, or (iii) a T. torosa chemical cue with quantitated TTX in it (~?6.2?×?10??8 moles/L).

Results
We found that the presence of TTX in any form significantly reduced crayfish movement and decreased the amount of food consumed over time. Crayfish responses to the anuran treatment did not significantly differ from controls.

Conclusion
Our laboratory results show that naturally occurring neurotoxin from native California newts limits invasive crayfish foraging and feeding rates, which may play a role in preserving local stream ecosystems by limiting invasive crayfish behaviors that are detrimental to biodiversity.
Data Release Calculations of BioLake climate data
Authors: Ryan C Burner; Richard E Erickson
Date: 2022-11-01 | Outlet: USGS GitLab
Climate data allow people to examine species distributions and possible distributions. This script takes ERA5-Land climate estimates (https://www.ecmwf.int/en/forecasts/datasets/reanalysis-datasets/era5) for precipitation and lake temperature and processes them to create summary climate layers for use with biological organisms in lakes. This code could be modified to use a different subset of years.

These BioLake raster data provide global estimates (~10.0 x 12.4 km resolution) of twelve bioclimatic variables based on estimated lake temperature. Eleven of these twelve variables (BioLake01 - BioLake11) are estimated for each of three lake strata: lake mix (surface) layer, lake bottom, and total lake water column. These eleven variables correspond to CHELSA (Climatologies at high resolution for the earth's land surface areas) bioclimatic variables BIO1 - BIO11, except that these BioLake variables are based on lake water temperature and CHELSA BIO1 - BIO11 variables are based on air temperature. CHELSA BIO is also calculated a finer spatial resolution (~1 x 1 km). The twelfth variable (BioLake20; months with non-zero ice cover) does not correspond to any CHELSA bioclimatic variable. The data are supplied as a multi-layer raster (.grd) file in the World Mollweide projection, accompanied by a header file (.gri) with layer names.

For BioLake layer download, see https://doi.org/10.5066/P96QLN5Y
Data Release BioLake bioclimatic variables based on ERA5-Land lake temperature estimates 1991-2020
Authors: Ryan C Burner; Richard E Erickson
Date: 2022-01-21 | Outlet: USGS ScienceBase
These BioLake raster data provide global estimates (~10.0 x 12.4 km resolution) of twelve bioclimatic variables based on estimated lake temperature. Eleven of these twelve variables (BioLake01 - BioLake11) are estimated for each of three lake strata: lake mix (surface) layer, lake bottom, and total lake water column. These eleven variables correspond to CHELSA (Climatologies at high resolution for the earth's land surface areas) bioclimatic variables BIO1 - BIO11, except that these BioLake variables are based on lake water temperature and CHELSA BIO1 - BIO11 variables are based on air temperature. CHELSA BIO is also calculated a finer spatial resolution (~1 x 1 km). The twelfth variable (BioLake20; months with non-zero ice cover) does not correspond to any CHELSA bioclimatic variable. The data are supplied as a multi-layer raster (.grd) file in the World Mollweide projection, accompanied by a header file (.gri) with layer names.
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